Leadership In Controlled Gene Expression


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Further progress in cell replacement strategies with implications for strategies to treat brain diseases

Generation of induced neurons via direct conversion in vivo

Proc Natl Acad Sci U S A. 2013 Vol. 110 (17): 7038-7043 (published ahead of print March 25, 2013).

Direct conversion of fibroblasts into functional neurons may be an attractive alternative to the pluripotent stem cell approach for studies of neuronal diseases and for cell therapy. So far it is possible to directly convert fibroblasts into functional neurons (induced neurons (iN) in vitro. Direct in vivo conversion has been shown in the pancreas and the heart, but not yet in the brain.

In the present study, scientists around A.Björklund and M.Parmar at Lund University in Sweden demonstrate that the same set of neural in vitro conversion factors is sufficient to convert fibroblasts and human astrocytes in vivo into neurons. They used lentiviral vectors carrying the 3 neuronal conversion factors Ascl1, Brn2a and Mytl1 (ABM) under Tet-On control to transduce GFP-labeled human fetal lung fibroblasts (HFL1) and a second lentivirus expressing the Tet-On Advanced transactivator that was cotransduced in all conversion experiments. Transduced HFL1 cells were grafted into the brain of adult rats and expression of conversion factors was initiated by addition of Doxycycline in the drinking water. Four weeks later cells coexpressing GFP and a neuronal marker (hNCAM) were detected, indicating fibroblast to neuron conversion. Conversion had taken place only in those animals which had been grafted with ABM-transduced cells and also exposed to Dox. Doxycycline was administered for 6 weeks only but iN could still be detected after 25 weeks which confirms long-term stability of the induced neuronal phenotype in the absence of exogenous gene expression. Similar results were obtained when human astrocytes were used; this is of particular interest as endogenous astrocytes may be a source of neurons in diseased brains and thus in vivo astrocyte to neuron conversion may open up new strategies for brain repair.

The results reported by Björklund and Parmar are of importance for novel treatments particularly for degenerative diseases such as Parkinson`s Disease (PD) where cell replacement via transplantation has already shown promise in animal studies but possibly also for others like Huntington's disease, amyotrophic lateral sclerosis (ALS) or Alzheimer's disease.

 

 

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Preservation of cell integrity during desiccation

Late embryogenesis abundant proteins protect human hepatoma cells during acute desiccation

PNAS 2012 Vol.109: 20859-64

Dehydration of living cells usually leads to cell death. Yet a number of organisms have found ways to survive severe droughts.  Accumulation of oligosaccharides like trehalose along with protective proteins is one functional mechanism observed in animals. LEA (Late Embryongeneis Abundant) proteins are supposed to play an important role in this process. They were first discovered in various plants but more recently have been detected in different animal groups, including insects, crustaceans and nematodes.

In a recent publication Steven Hand and collaborators attempted to enhance desiccation tolerance in mammalian cells. They expressed two LEA proteins from brine shrimp (AfrLEA2 and AfrLEA3) in HepG2 cells under control of the Tet-On 3G system. In addition cells were constitutively expressing an exogenous trehalose transporter (TRET1) to allow trehalose uptake. Subsequent analyses showed significant induction and tight control of LEA protein expression depending on the presence or absence of Doxycycline. Upon desiccation and rehydration, cells without LEA proteins or trehalose exhibited 0% membrane integrity compared to 98% of cells expressing either AfrLEA2 or AfrLEA3 and loaded with trehalose. Surprisingly, expression of Tet-controlled AfrLEA3 alone in the absence of trehalose conferred 94% protection.

Overall the results presented by Hand et al. clearly show that LEA proteins can confer increased desiccation tolerance to mammalian cells. In light of the interest in cell therapies, this is an encouraging step towards cell stabilization for storage in the dried state.

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Tet-Transgenic Rodents: a comprehensive, up-to date database

On Nov. 23, 2012 the article "Tet-Transgenic Rodents: a comprehensive, up-to date database" was published online in Transgenic Research. You can get access to the publication using this link or download here.

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First Tet-On® 3G transgenic mouse line published

Transient, Inducible, Placenta-Specific Gene Expression in Mice

Endocrinology 2012 Vol. 153: 5637-44.

The Tet technology, which is broadly applied for tight and fully reversible control of gene expression in higher eukaryotes was transferred into transgenic mice many years ago. Since then, the Tet transactivator and the responsive promoter, constituting components of this binary expression system, have been optimized and in 2010 the 3rd generation of the technology was launched by Clontech. Meanwhile more than 500 mouse lines expressing components of the Tet technology are available through academic research laboratories or repositories around the world and a compilation of published mouse lines is available on TET Systems’ website.

Nihar Nayak and colleagues from Stanford University are studying placental function and pregnancy disorders. They recently published a paper on the generation of the first transgenic mouse line using the newest generation Tet-On 3G. Using a novel, integrase-based, site specific approach they first generated a transgenic mouse line which ubiquitously expresses the Tet-On 3G transactivator under control of the CMV early enhancer/chicken β actin promoter.  Blastocysts from such animals were infected with a lentivirus carrying a PTRE3G promoter -luciferase reporter construct and a constitutively active GFP expression unit for identification of infected cells. By culturing the infected blastocysts the authors were able to measure dose-response curves and kinetics of gene expression after induction by doxycycline using bioluminescence imaging. The signal intensity obtained by the light emitting blastocysts was strongly dose dependent and could be detected as early as 15 min after doxycycline was added to the culture medium. The maximal gene induction was found already after one hour leading to a 1000 fold gene increase. Removal of doxycycline from the culture medium was accompanied by loss of gene expression over the course of 8 h, demonstrating the superior and reversible properties of the 3rd generation Tet components in vivo.

After transferring the blastocytes into pseudo-pregnant foster mothers, fetuses developed normally and in vivo imaging revealed uniform and high level dox-induced gene expression in the transgenic placentas. Most impressively, the authors were able to control reporter gene expression in the same mice at different stages of pregnancy.

This manuscript describes the first transgenic application of the Tet-On 3G technology and demonstrates its improved utility. This model will allow Dr. Nayak and colleagues to further understand placental development and function and the transgenic Tet-On 3G transactivator mouse line also will be very useful for studies by other scientists.

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New approach to fight obesity

Programming human pluripotent stem cells into white and brown adipocytes

Nature Cell Biology Vol. 14: 209-221

The number of overweight people is increasing worldwide and obesity has doubled within the last 30 years. Concomitantly metabolic diseases like diabetes and heart disease are on the rise and adipocyte dysfunction is implied to contribute to disease progression.

Adipogenesis is a natural process leading to generation of white and brown adipocytes. While white fat cells are specialized on energy storage, brown adipose tissue is involved in the maintenance of body temperature. As the number of brown adipocytes decreases with age and is greatly reduced in obese individuals there is increasing interest in better understanding adipogenesis and to explore possibilities to treat obesity by converting white to brown fat cells. So far, studies on adipocyte biology are hampered by the limited lifespan of cultured cells obtained from adipose tissue of patients. Furthermore, differentiation of mesenchymal stromal cells (MSC) and adipose-derived stromal vascular cells (ADSVC) into adipocytes suffers from limited proliferative and differentiation capacity.

Recently Cowan and colleagues published in Nature Cell Biology a method to efficiently differentiate human pluripotent stem cells (hiPSC) into white and brown adipocytes. To that end they cultured hPSCs under conditions favoring generation of mesenchymal progenitor cells (MPCs). Induction of adipogenesis in response to known inducers like insulin, rosiglitazone and dexamethasone was inefficient leading to only a low percentage of white adipocytes. In contrast, transduction of MPCs with 2 lentiviruses expressing the Tet-On regulator and Peroxisome Proliferator-Activated Receptor-γ(PPARG2,(a key regulator of white adipocyte development) under Tet control increased the number of cells showing the morphological characteristics and marker protein expression pattern of white adipocytes in almost 90% of the population.

Similarly, transducing MPCs with lentiviruses expressing various tet-controlled factors favoring brown adipocyte differentiation  leads to cells with multilocular fat vacuoles and high levels of uncoupling protein 1(UCP1), both characteristic for brown adipocytes.  Extensive further characterization of both cell types confirmed the type of differentiated adipocyte.

This elegant application of the Tet technology has allowed the establishment of an efficient method for the generation of white and brown fat cells from hiPSCs as prerequisite to establishing assays to screen molecules that may convert white to healthy brown cell types.

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New insights into tumorigenesis of breast cancer expressing mutant p53

Mutant p53 disrupts mammary tissue architecture via the mevalonate pathway

Cell 2012 Vol. 148(1-2): 244-258

There is much evidence that wild-type p53 acts as a tumor suppressor, while in its mutant form it promotes tumorigenesis in many different types of cancer. In a multi-institutional study lead by Dr. Carol Prives of Columbia University a 3D cell culture model was used to study cellular changes of MDA-derived cells. During breast carcinogenesis mammary tissue architecture is disrupted and the present study used this model to delineate the phenotypic effects of mutant p53 in breast cancer. Utilizing doxycycline regulated shRNA technology developed at CSH directed against mutant p53 the authors could demonstrate that depletion of mutant p53 is sufficient to revert breast cancer cells to a more “non-malignant” morphology. The authors could show that dose-dependent progressive loss of malignant characteristics correlated with decreasing levels of mutant p53. Genome wide expression profiling of breast cancer cell lines indicated that a number of key enzymes of the mevalonate pathway were down-regulated when mutant p53 was depleted, pointing to a functional regulation of mutant p53 in this pathway. To investigate the potential therapeutic relevance of their findings, the authors analyzed expression data of mutant p53 and genes of the mevalonate pathway in samples of human breast cancer patients and noticed up-regulation of several members of the pathway in human tumors expressing mutant p53.  Furthermore, in cell culture experiments ‘Fatostatin’, a cholesterol lowering molecule, prevented mutant p53 from binding to the promoter of the HMG-CoA reductase promoter and also changed 3D morphology of two breast cancer cell lines. Thus, in the future the mevalonate pathway may serve as a therapeutic target for breast cancers bearing mutant p53.  

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New animal models for disease studies

Two recently published papers describe use of the Tet-On System in the generation of transgenic zebrafish and transgenic dogs that will be useful to model various human diseases.

Inducible and repressable oncogene-addicted hepatocellular carcinoma in Tet-on xmrk transgenic zebrafish

J.Hepatol. 2011 Aug 31. [Epub ahead of print]

For many years zebrafish has been an important model organism in developmental biology. Moreover, as comparison of the human and zebrafish genome sequence shows conservation of cell-cycle genes, tumor suppressor and oncogenes, zebrafish have gained increasing popularity to model different human diseases including cancer. Characteristics like external development, optical clarity and easy maintenance at relatively low cost compared to other laboratory animals, make zebrafish attractive for chemical screenings. Finally their high rate of reproduction and the fact that zebrafish embryos are permeable to various small molecules make them attractive even for high-throughput experiments.

In their publication Gong and collaborators generated transgenic zebrafish expressing xmrk, a fish oncogene encoding a hyperactive version of epidermal growth factor homolog under control of the Tet-On Advanced System. Use of the zebrafish fabp10 promoter directed expression of the transactivator specifically to the liver as verified by whole mount in situ hybridization. Subsequent analysis revealed that all fish, independent of age and sex, developed hepatocellular carcinoma as long as they were kept in the presence of doxycycline. Removal of doxycycline from the water led to tumor regression to the point where all animals showed liver morphology and histology indistinguishable from control. Furthermore Erk and Stat-5 which are downstream components of the EGFR pathway, showed up-regulation after induction of xmrk and could be targeted by their specific inhibitors demonstrating the potential of this transgenic model for screening and testing of anti-cancer drugs.

 

Generation of transgenic dogs that conditionally express green fluorescent protein

Genesis 49(6), 2011 [Epub ahead of print]

In 2009 the group of Byeong Chun Lee at the Department of Theriogenology and Biotechnology at Seoul National University generated the first transgenic dogs by somatic cell nuclear transfer, expressing red fluorescent protein under control of a constitutively active promoter. Now the same group reports the second generation of transgenic dogs with conditional, Tet-regulated expression of eGFP.

Canine fetal fibroblasts were infected with a retroviral vector harbouring both, the Tet-On Advanced transactivator controlled by the phosphoglycerate kinase promoter (PGK) as well as the TRE-tight controlled eGFP cassette. In the established fetal Tet-On cells, eGFP could be tightly regulated with >40 fold induction after addition of doxycycline (Dox) to the culture medium. Somatic cell nuclear transfer was applied to generate reconstructed embryos, which were used to generate the transgenic dog line. Treating these dogs with Dox for two weeks, EGFP fluorescence could be observed in the whole body, with no adverse clinical signs. In addition the Tet-On eGFP dog did not shown any “leaky” expression.

As dogs (Canis familiaris) share many common diseases with humans including diabetes and cancer this study opens a new avenue for the development of human disease models.

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Key player in triple negative breast cancer (TNBC) identified

Activation of Multiple Proto-oncogenic tyrosine Kinases in Breast Cancer via Loss of the PTPN12 Phosphatase

Cell 2011 Vol.144: 703-718

On our website we recently “highlighted” two publications on viral toolkits for Tet-inducible RNA interference. An article by Westbrook and collaborators published last month in “Cell” now describes a first successful application of these inducible vectors in uncovering the role of PTPN12 in triple negative breast cancer underscoring the importance of the Tet technology in elucidating the role of key players in complex signaling networks.

Currently breast cancer is classified into types expressing ER/PR or those overexpressing HER2. Medical treatment for these types is available but about 15-20% of breast cancers, called “triple-negative” breast cancers (TNBC) are characterized by the lack of expression of either of these cancer specific proteins. Our lack of understanding of the molecular principles behind this form of breast cancer is reflected in a poor prognosis for patients suffering from this aggressive disease.

Westbrook and colleagues focus on tumor suppressor proteins and identify the tyrosine phosphatase PTPN12 as an important player in TNBC.  Starting with a genetic screen for anchorage independent growth of human mammary epithelial cells (HMEC) they could identify PTPN12 as a top candidate. In their subsequent characterization, the Tet technology was instrumental in proving that PTPN12 is involved in oncogenic transformation and acts as a growth suppressor by antagonizing key receptor kinase pathways. As loss of PTPN12 is a common feature of a large fraction of TNBCs the findings by Westbrook and colleagues support the notion that PTPN12 is a possible therapeutic target for this type of currently intractable form of cancer.

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New viral toolkits for robust, Tet-inducible shRNA expression

Toolkit for evaluating genes required for proliferation and survival using tetracycline-regulated RNAi

Nature Biotechnology 2011 Vol. 29 (1): 79-83

The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo

PNAS 2011 108 (9):3665-3670

RNA interference has been instrumental to carry out loss-of-function studies in mammals and has provided new insights into basic cellular mechanisms and the origin of human diseases. Meanwhile RNAi-based approaches are widely applied not only to study gene function but also e.g. in high-throughput screens to identify protein coding or microRNA genes encoding putative drug targets.

Achieving high-level shRNA expression is a major challenge in achieving gene silencing via RNA interference. This is of particular importance for genes involved in cell survival and proliferation where cells with inefficient shRNA expression have a selective advantage and thus will out-compete those with high RNAi expression.  In this respect the use of tetracycline controlled shRNA expression systems is extremely useful as expression can be triggered transiently after disease manifestation, effectively modelling therapeutic intervention.

Two recent publications by G.Hannon, S.Lowe and colleagues and by Th. Westbrook, St. Elledge and their coworkers describe new sets of viral vectors that allow identification, tracking and isolation of cells that productively express Tet-inducible shRNA. To avoid silencing and to ensure robust Tet-inducible shRNA expression, both teams follow similar strategies: a single viral vector carries a Tet-On transactivator and the Tet-inducible shRNA while direct linking of fluorescent reporters to the shRNA allows easy monitoring of conditional shRNA expression.

By indirect fluorescent tracking of shRNA expression these new vectors allow the isolation of shRNAs with anticancer potential in complex cellular and even in animal screening systems which would have been missed otherwise as shown for the Rpa3 gene in the Nature Biotechnology article.

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New approach to cure diabetes

Conversion of adult pancreatic a-cells to beta-cells after extreme beta-cell loss

Nature 2010 Vol. 464: 1149-1154

In diabetes, insulin-producing beta-cells of the pancreas are destroyed (Type-1 Diabetes) or dysfunctional (Type-2 Diabetes) resulting in abnormally high blood glucose levels eventually leading to severe organ damage. New ways to find a cure for diabetes are under investigation and comprise:

  • generation of beta-cells from ES-cells
  • replication of existing beta-cells
  • conversion of other cells into functional beta-cells

In a study recently published in Nature, Herrera and colleagues used transgenic mice expressing the Diphteria Toxin (DT) receptor under control of the rat insulin promoter to specifically ablate beta-cells. Following DT treatment, 99% of the beta-cells in adult mice were destroyed. However, functional beta-cells regenerated slowly in all pancreatic islets in the following months. To determine whether these new insulin producing cells emerge from other sources than pre-existing beta-cells, Herrera and colleagues carried out careful cell lineage tracing studies. Using an elaborate system of transgenic mice carrying cells that were labeled before beta-cell ablation, they first showed that the increase in beta-cell mass does not result from increased beta-cell proliferation but from regeneration of non-beta cells. In the following detailed analysis the Tet-On Advanced System was instrumental in determining that regenerated beta-cells where derived from glucagon-producing alpha-cells. Thus when almost all beta-cells are destroyed but alpha-cells are spared, functional beta-cells emerged through transdifferentiation of alpha-cells. The findings by Herrera and colleagues may provide new approaches for diabetes therapies.

The present publication provides another powerful example of ‘recycling’ previously established transgenic Tet mice when generation of mice carrying multiple transgenes is required to address complex scientific questions. In this context the continuously growing ‘zoo’ of Tet transgenic mice, accessible to academic scientists through repositories like The Jackson Labs, EMMA and Riken, will further facilitate the use of the Tet Technology to perform breakthrough science.

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Turning skin cells into neuronal cells while bypassing the pluripotent, embryonic state

Direct conversion of fibroblasts to neuronal cells by defined factors under Tet-control

Nature 2010 Jan 27 (Epub ahead of print)

A new highlight in cellular reprogramming was recently published in Nature. It was previously shown that a combination of four transcription factors was sufficient to reprogram mouse and human fibroblasts to a pluripotent state. Now scientists from Stanford University were able to convert mouse fibroblasts directly into functional neurons bypassing this pluripotent state.

In the publication highlighted here, Wernig, Südhof and colleagues asked whether expression of neural-lineage-specific transcription factors could directly turn skin cells into neurons. To this end they infected mouse embryonal fibroblast with a lentiviral pool of Tet-controlled neuronal transcription factors. They identified a subset of 5 factors sufficient for conversion of fibroblasts into neuronal cells as determined by morphological traits and electrophysiological recordings of membrane properties. In subsequent experiments they evaluated whether induced neuronal (iN) cells could even be derived from postnatal cells. To address this question they isolated fibroblasts from 3 day old mice of lines expressing the Tet-On transactivator. Lentiviral transductions of these fibroblasts with the previously identified, Tet-controlled transcription factors revealed that the same set of factors was sufficient to derive iN (induced neuronal) cells from postnatal cells. Further characterization of the relative contribution of each of the five factors showed that a single factor "Ascl1" is critical to induce some neuronal traits and that expression of 2 other additional factors (Brn2 and Myt1l) facilitates neuronal conversion and maturation.

These findings mark a breakthrough in biomedical stem cell science. It may well be possible to convert any "adult" cell type into other lineages thus opening up new perspectives for regenerative medicine.

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Tet Technology applied to study the mouse transcriptome

Uncovering Early Response of Gene Regulatory Networks in ESCs by Systematic Induction of Transcription Factors

Gene regulation networks determine cellular identity and destiny. Alterations to these interactive networks result in cellular differentiation processes but also pathological developments. Understanding the interactions of the roughly 2000 transcription factors encoded in the mouse genome is challenging but key towards our understanding of the mechanisms involved in these regulatory biological systems.
M.S.H. Ko and collaborators dared to tackle this tremendous task and have made first inroads applying the Tet system for the systematic and reversible perturbation of the TF network. In a recent publication they describe the generation of embryonic stem cell (ESC) lines, each equipped with one of 50 different transcription factors under control of the Tet gene switch. All mutant ESC lines were generated by inserting individual FLAG tagged transcription factor genes into one defined tetracycline controllable locus (ROSA-Tet-locus, Masui et al., 2005). This locus allows the reproducible and tightly controlled expression of the inserted TF gene, which can be easily introduced by recombinase mediated cassette exchange. Induction of the respective transcription factor in each ES cell line allows the comparative study of the resulting network perturbations under analogous conditions. 
Initial microarray studies comparing induced versus non-induced state in these ES cell lines revealed clear differences between various TFs in terms of relative impact on the perturbations in the global transcriptional network. One of the genes with an exceptionally strong effect on the transcriptome was the caudal type homeobox 2 gene (Cdx2). Cdx2 over-expressing cells were subsequently used in a detailed proof of principle study demonstrating the utility of the described ESC lines. An impressive amount of methods was applied to characterize the effect of Cdx2 induction in the stem cells comprising ChIP-qPCR analysis for the identification of DNA binding sites and FLAG immunoprecipitation combined with mass spectrometric analysis to isolate and identify protein binding partners.
While this is only the first insight into these complicated networks, the tetracycline inducible ES cell lines established and initially characterised by Ko and colleagues in the present publication provide a fundamental resource for reverse engineering biological networks not only in ES cells but also in differentiated cells or even in animals models.

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Tetracyline inducible sterility prevents escape of transgenic animals into the wild

Development of repressible sterility to prevent the establishment of feral populations of exotic and genetically modified animals  

In a recent publication in "Aquaculture", R. Dunham and collaborators present first results on a novel method that allows commercial breeding  as shown for catfish and oysters but renders them reproductively non-viable in the wild. The method relies on the identification of species-specific developmental switches which are "knocked-out" using inducible expression of antisense or ds- constructs. In catfish, the authors combined a stage specific promoter driving expression of the Tet-Off transactivator controlling expression of antisense or double stranded transcripts directed against BMP2 which is known to be crucial during early embryonic development. In oysters, HOXCG1 / HOXCG3 genes were targeted which encode transcription factors specific for oyster larval development. In both species, tTA-dependent down-regulation of the target gene resulted in induced mortality. Embryos that were maintained in the presence of doxycyline showed significantly lower mortality, sometimes comparable to control groups that were treated with unspecific DNA.
Animals escaping from commercial farms endanger wild populations and the surrounding marine ecosystem.  While the data are far from turning this method into a soon to be implemented practical solution, they hold promise that a similar approach with improved strategies (e.g. gene switch under Tet-On control; non-antibiotic inducers, etc.) may prevent or at least significantly reduce the environmental risks of "fish farming" in the not too distant future.

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Use of Flp-Mediated Cassette Exchange for reproducible Tet-inducible expression at specific loci in HeLa cells

Inducible expression of coding and inhibitory RNAs from retargetable genomic loci

The utility of regulatable expression systems is often limited by the difficulty to identify those clonal cell lines which allow the intended efficient control of the gene of interest. Weidenfeld et al. have addressed this problem and established a RMCE (recombinase-mediated cassette exchange) based system for the generation of stable tetracycline-inducible cell lines with predictable expression characteristics. To achieve this goal, the authors functionally identified genomic loci in a new HeLa-rtM2 cell line which warrant a homogeneous and highly dynamic tetracycline response. A HygTk cassette was subsequently placed in these loci, allowing for efficient Flp recombinase mediated exchange of expression vectors. The RMCE mediated insertion of Tet-controlled genes of interest reproducibly preserved the quantitative and qualitative properties of the parent cell line from the first screen. The potential of this approach as an expedient tool in functional genomics was highlighted by its application to the efficient, microRNA-mediated downregulation of endogenous genes.

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New, Virus-free Methods to Generate iPS Cells

piggyBac transposition reprograms fibroblasts to induced pluripotent stem cells

Virus-free induction of pluripotency and subsequent excision of reprogramming factors

Nature 2009 Mar 1. [Epub ahead of print]

Inducible pluripotent stem cells (iPS) are generated by activating genes in adult cells to "reprogram" them and, consequently, have many characteristics of embryonic stem cells. So far their therapeutic use seems limited because established reprogramming technologies are based on viral delivery of reprogramming factor transgenes, raising safety concerns for patients treated with such cells.
Two groups of scientists (Woltjen et al. and Kaji et al.) report in this month`s Nature on a new way to transform human fibroblasts into iPS cells.  In the first publication, Nagy and colleagues used the piggyBac transposon to introduce the four transcription factors sufficient to generate iPS cells. In order to achieve temporal expression control, reprogramming factors were placed behind a Tet-On responsive promoter. Stable iPS cells expressed various characteristic pluripotency markers and, most interestingly, piggyBac insertions allowed seamless removal of reprogramming factors after their expression had become dispensable.
Both simplified and virus independent methods of iPS cell generation will further accelerate the understanding of the reprogramming process and may open up new ways for clinical approaches to regenerative medicine.

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Metastasis: how does it really work?

Seeding and propagation of untransformed mouse mammary cells in the lung

Science 2008 Vol 321 (5897): pp 1841-1844

Since many years the metastatic dissemination of cancer cells has been proposed to occur at a very late stage of tumor development. It was thought that mutations or changes in expression levels accumulate in tumor cells over time before they are able to evade from their primary location. Recently this paradigm is more and more put into question by data suggesting that the metastatic process may begin earlier than previously thought. This assumption is now supported by work from Podsypanina et al. published in Science 321, 1841 (2008). The authors manipulated mouse mammary cells, so that the timing of myc and ras oncogene expression is experimentally controlled by the Tet Technology and injected them into the bloodstream of mice. The cells were able to establish residence in the ectopic environment of the lung and remained clinically undetectable in the absence of oncogene expression. After Doxycycline induced activation of the introduced oncogenes the cells developed into metastatic pulmonary lesions.
These results strongly suggest that metastatic dissemination is not limited to the final phase of primary tumor development, but might occur much earlier. Aside from their significance for our understanding of the mechanisms of cancer metastasis these results could directly impact strategies for cancer therapy in the near future.

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New Mouse Model for Kidney Diseases

An efficient and versatile system for acute and chronic modulation of renal tubular function in transgenic mice.

09/14/2008
Nat Med. 2008 Vol. 14(9) pp. 979-84

In a recent publication in Nature Medicine a new transgenic Tet-On Advanced mouse line for Tet-regulated gene expression studies specifically in the kidney is described. Researchers from R.Koesters lab in Heidelberg, Germany used control elements of the mouse Pax8 promoter to direct high levels of expression of Tet-On Advanced (rtTA2s-M2) to all proximal and distal tubules and the entire collecting duct system of both embryonic and adult kidneys. Using crosses of Pax8-rtTA mice with tetracycline-responsive c-MYC mice the authors describe a new, inducible model of polycystic kidney disease that can mimic adult onset and that shows progression to renal malignant disease. In a second transgenic model the expression of transforming growth factor-beta1 is targeted to the kidney, which leads to the successful establishment of an inducible model of renal fibrosis. Finally the authors set up a conditional knockout model using the Pax8- Tet-On Advanced mouse line in combination with a Tet-inducible Cre line LC1. In this combination an inducible deletion of the gene encoding tuberous sclerosis complex-1 was achieved, which resulted in the early outgrowth of giant polycystic kidneys reminiscent of autosomal recessive polycystic kidney disease. These experiments establish Pax8- Tet-On Advanced mice as a new powerful tool for conditional modelling of renal diseases in transgenic mice.

 

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Sporadic autonomic dysregulation

Sporadic autonomic dysregulation and death associated with excessive serotonin autoinhibition.

08/28/2008
Audero et al. Science 4 July 2008, Vol. 321. no. 5885, pp. 130 - 133

Sudden infant death syndrome (SIDS) is the leading cause of death in the postneonatal period in children in developed countries. Although the conditions resulting in death are not understood, there is evidence mainly from anatomical studies that point to abnormalities in the brain's serotonin system which makes infants susceptible for SIDS. As such, significant differences in the number of serotonin receptors and serotonergic neurons are detected in the brainstem of SIDS babies which are suspected to cause altered serotonin homeostasis, leading to sudden death.


In a recent publication in Science Cornelius Gross and colleagues from the European Molecular Biology Laboratory (EMBL) in Monterotondo, Italy, report their findings on transgenic mice with deficient serotonin regulation. The genetically modified mice carry a Tet- controlled expression cassette of the serotonin 1A autoreceptor. Mice conditionally overexpressing Htr1a (Htr1aRO) developed normally until day 21 but then died to a high percentage before reaching adulthood. Death could be prevented by treating these mice with Doxycyline, thereby reverting receptor overexpression. Careful radiotelemetric monitoring revealed that bradycardia and hypothermia always preceeded death indicating a general failure to maintain sympathetic tone. Infants that have been monitored during SIDS events displayed similar symptoms. Thus in contrast to serotonin knockout mice which are viable, this novel Tet-controlled disease model mimics critical aspects of this fatal syndrom and may help identify diagnostic markers and prophylactic measures for the prevention of SIDS..

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A drug-inducible transgenic system

A drug-inducible transgenic system for direct reprogramming of multiple somatic cell types.

07/11/2008
Wernig et al. Nat Biotechnol. 2008 Jul.1 Epub ahead of print

Pluripotency can be induced in somatic cells by ectopic expression of transcription factors Oct4, Sox2, Klf4 and Myc. So far this is done by infecting fibroblasts with high-titer retroviral vectors, which results in reprogramming and leads to the formation of induced pluripotent stem cells (iPS) at a low frequency. In a recent publication members from R.Jaenisch?s lab at MIT have significantly enhanced this process by using genetically modified, homogenous fibroblasts and Tet- regulated expression of reprogramming factors.


In a first step, iPS cells were produced by infecting fibroblasts containing the Tet-On Advanced transactivator with lentiviruses carrying Tet-inducible reprogramming factors and subsequent reprogramming after addition of Doxycycline. Pluripotent stem cells were selected and chimeric mice were generated. In a second step Wernig et al. used fibroblasts from the iPS derived chimeric animals which now contain identical proviral insertions. Reprogramming efficiency was 25-50 fold enhanced compared to previous approaches. This method significantly alleviates factor-based reprogramming and will thus facilitate studies on the molecular events leading to epigenetic reprogramming. Furthermore this approach will allow generation of large numbers of identical cells required for high throughput screens for chemicals replacing the original reprogramming factors.

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Site-directed, virus-free, and inducible RNAi

Site-directed, virus-free, and inducible RNAi in embryonic stem cells.

03/20/2008
Wang, J. et al. 2007 PNAS 104 (52): 20850-20855

Pluripotency can be induced in somatic cells by ectopic expression of transcription factors Oct4, Sox2, Klf4 and Myc. So far this is done by infecting fibroblasts with high-titer retroviral vectors, which results in reprogramming and leads to the formation of induced pluripotent stem cells (iPS) at a low frequency. In a recent publication members from R.Jaenisch?s lab at MIT have significantly enhanced this process by using genetically modified, homogenous fibroblasts and Tet- regulated expression of reprogramming factors.


In a first step, iPS cells were produced by infecting fibroblasts containing the Tet-On Advanced transactivator with lentiviruses carrying Tet-inducible reprogramming factors and subsequent reprogramming after addition of Doxycycline. Pluripotent stem cells were selected and chimeric mice were generated. In a second step Wernig et al. used fibroblasts from the iPS derived chimeric animals which now contain identical proviral insertions. Reprogramming efficiency was 25-50 fold enhanced compared to previous approaches. This method significantly alleviates factor-based reprogramming and will thus facilitate studies on the molecular events leading to epigenetic reprogramming. Furthermore this approach will allow generation of large numbers of identical cells required for high throughput screens for chemicals replacing the original reprogramming factors.

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The genetic design of signalling cascades

The genetic design of signalling cascades to record receptor activation.

03/20/2008
Barnea, G. et al. 2008 PNAS 105: 64-69

In a recent publication in PNAS, researchers from Sentigen Biosciences in collaboration with R. Axel?s laboratory at Columbia University, established a novel system to monitor protein interactions which was applied to GPCRs, receptor tyrosine kinases and steroid hormone receptors. A fusion protein consisting of a membrane receptor and a Tet-regulated activator tethers Tet-Off to the cell membrane. Sequences of both proteins are separated by a linker containing a protease cleavage site. A second fusion protein links a viral protease to a cellular protein that interacts only with the activated receptor. Upon ligand binding to the receptor the protease is recruited to its cleavage site and will release the Tet-off transcription factor which subsequently will activate reporter gene expression. This so-called ?Tango- assay? converts the transient response of ligand binding to a receptor into a stable and easily quantifiable reporter gene signal thus allowing to record receptor activation without interference from endogenous signaling pathways. The assay was developed for the three different types of receptors mentioned above and further on was shown to allow identification of endogenous ligands for orphan receptors as exemplified for GPR1.

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Organ size is limited by the number of embryonic progenitor cells

Organ size is limited by the number of embryonic progenitor cells in the pancreas but not the liver.

29/03/2007
Stanger BZ et al. 2007 Nature 445:886-891

Understanding of the mechanisms and key determinants that control vertebrate organ size is rather limited. In a recent publication in Nature, Stanger et al. elegantly demonstrated that the number of progenitor cells determines final organ size of the pancreas rather than endocrine factors or extrinsic signals. Using transgenic mice expressing diphtheria toxin (DTA) under Tet-control, they selectively destroyed pancreatic progenitor cells at distinct time points during embryogenesis. Newborn mice with progenitor cell ablation during the critical embryonic period showed nearly a complete absence of the pancreas. Furthermore, when the number of progenitor cells was reduced due to DTA expression during a brief period early in development, prenatal embryos reproducibly had significantly smaller pancreata, indicating that the remaining progenitor cells were unable to compensate for the reduced cell number. Performing similar experiments in mice containing Tet regulated DTA expression directed against hepatic progenitor cells demonstrated that, in liver growth, compensation occurs rapidly even after severe reduction of hepatic progenitor cell numbers. Thus, while the number of progenitor cells is a critical determinant of pancreas size, liver size determination relies on extrinsic factors independent from the progenitor cell pool size.

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Dissecting self-renewal

Dissecting self-renewal in stem cells with RNA interference.

09/07/2006
Ivanova N. et al; Nature. 2006 Jun 11

In one of the most recent applications of the Tet-System, scientists at Princeton University identified key regulators of stem cell renewal and differentiation in mouse ES cells. Starting from a large number of down-regulated genes detected in a microarray screening approach on mouse ES cells undergoing retinoic acid-induced differentiation, candidates suspected in the control of stem cell fate were identified. Transduction of murine ES cells with lentiviral vectors encoding constitutively expressed shRNAs directed against each of the suspected regulators was performed to measure ES cell differentiation in a fluorescence-based competition assay. Down regulation of several target messenger RNAs was associated with morphological changes and loss of alkaline phosphatase activity, indicative of a differentiated phenotype. In order to provide functional evidence for involvement of the suspected regulators in self-renewal of ES cells, a genetic complementation strategy (rescue) was devised. For this purpose, the original shRNA lentiviral vectors were modified to allow Tet-induced expression of the shRNA-targeted candidates. Transduction of Tet-On-expressing ES cells with suspected regulators under Tet control revealed that self-renewal became doxycycline-dependent, suggesting specific biological roles as potent regulators of stem cell renewal for seven of the identified genes.

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HP-Regulatable Gutless Adenovirus

Regulatable Gutless Adenovirus Vectors Sustain Inducible Transgene Expression in the Brain in the Presence of an Immune Response against Adenoviruses.

Xiong W. et al; J Virol. 2006 Jan;80(1):27-37.

In a recent publication in Journal of Virology, Xiong and colleagues evaluated high-capacity adenoviral vectors encoding the improved synthetic Tet-On transactivator (rtTA2S-M2) and tTS the tetracycline-controlled transcriptional silencer for their usefulness as clinical vectors. As expected they showed that in vivo reporter gene expression was high in the presence of Dox and could be downregulated to basal levels after removal of the inducer. Most remarkably regulation of expression also worked in adenovirus-immunized animals proving that Tet-dependent regulation of gene expression is effective in vivo even in the presence of a systemic immune response against the vector.

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